|
ID
|
Organism
|
Assembly
|
File type
|
Name
|
Source
|
Reference
|
Owner
|
Public
|
|
Human |
hg38 |
HiCMatrix |
Hi-C Immortalized Liver cells (DpnII) |
Job Dekker, UMMS |
— |
admin |
✔ |
|
Human |
hg38 |
HiCMatrix |
Hi-C Neural progenitor cells (MboI) |
NEUROD1 Intrinsically Initiates Differentiation of Induced Pluripotent Stem Cells into Neural Progenitor Cells |
— |
admin |
✔ |
|
Human |
hg38 |
HiCMatrix |
Hi-C gm12878 (MboI) |
Rao SS et al. (2014) PMID:25497547 |
— |
admin |
✔ |
|
Human |
hg38 |
HiCMatrix |
Hi-C immortalized Blood Cells (HindIII) |
Liquid chromatin Hi-C characterizes compartment-dependent chromatin interaction dynamics. Belaghzal H, Borrman T, et al., Nature genetics 2021 |
— |
admin |
✔ |
|
Human |
hg38 |
HiCMatrix |
Hi-C immortalized Fibroblasts (DpnII) |
Systematic evaluation of chromosome conformation capture assays. Akgol Oksuz B, Yang L, et al., Nature methods 2021 |
— |
admin |
✔ |
|
Human |
hg38 |
HiCMatrix |
Hi-C induced pluripotent stem cells (DpnII) |
Job Dekker, UMMS |
— |
admin |
✔ |
|
Human |
hg38 |
HiCMatrix |
Hi-C primary Lung cells (MboI) |
A 3D map of the human genome at kilobase resolution reveals principles of chromatin looping. Rao SS, Huntley MH, et al., Cell 2014 |
— |
admin |
✔ |
|
Human |
hg38 |
HiCMatrix |
Hi-C stem cell derived Cardiac muscle cells (MboI) |
Transcriptionally active HERV-H retrotransposons demarcate topologically associating domains in human pluripotent stem cells. Zhang Y, Li T, et al., Nature genetics 2019 |
— |
admin |
✔ |
|
Human |
hg38 |
HiCMatrix |
Hi-C stem cell derived myoblasts (MboI) |
Transcriptionally active HERV-H retrotransposons demarcate topologically associating domains in human pluripotent stem cells. Zhang Y, Li T, et al., Nature genetics 2019 |
— |
admin |
✔ |