Phenotypes
Db Link Name Definition Comment Is a
HPO HP:0000490 Deeply set eye "An eye that is more deeply recessed into the plane of the face than is typical." [PMID:19125427] This finding should be distinguished from a prominent supraorbital ridge or inferior orbital margin. In Deeply set eyes, the globe is recessed in comparison to the overall prominence of the face. There is no known objective measurement, and diagnosing this feature depends heavily on the experience of the observer. HP:0100886
HPO HP:0000520 Proptosis "An eye that is protruding anterior to the plane of the face to a greater extent than is typical." [HPO:sdoelken, PMID:19125427] Some sources define "exophthalmos" as a protrusion of the globe greater than 18 mm and "proptosis" as a protusion equal to or less than 18 mm. Others define "exophthalmos" as protusion secondary to endocrine dysfunction and "proptosis" as any non-endocrine-mediated protusion (Source: Wikipedia). This finding should be distinguished frm underdevelopment of the supraorbital ridge or maxilla/zygoma. In proptosis, the globe is anteriorly protuberant to the overall plane of the face. HP:0100886
HPO HP:0000238 Hydrocephalus "Hydrocephalus is an active distension of the ventricular system of the brain resulting from inadequate passage of CSF from its point of production within the cerebral ventricles to its point of absorption into the systemic circulation." [HPO:probinson, PMID:18211712, PMID:19410151] Hydrocephalus results from an imbalance between the rate of production of cerebrospinal fluid (CSF), mainly in the choroid plexus, and its reabsorption in the subarchnoid space over brain and spinal cord. HP:0002118, HP:0002921
HPO HP:0030799 Scaphocephaly "Scaphocephaly is a subtype of dolichocephaly where the anterior and posterior aspects of the cranial vault are pointed (boat-shaped). Scaphocephaly is caused by a precocious fusion of sagittal suture without other associated synostosis." [HPO:probinson, PMID:16156241, PMID:23960302] Dolichocephaly is a term in wide use to describe any long narrow head, with a cephalic index usually below 75%. Scaphocephaly, derived from the Greek skaphe (a light boat or skiff), describes a specific variety of a long narrow head that resembles an inverted\nboat with a keel. Scaphocephaly thus refers to an inverted keellike appearance to the skull, with the widest part of the skull in the temporal rather than parietal area and with palpable ridging over part or all of the sagittal suture (PMID:16156241). HP:0000268
HPO HP:0005328 Progeroid facial appearance "A degree of wrinkling of the facial skin that is more than expected for the age of the individual, leading to a prematurely aged appearance." [HPO:probinson] HP:0007495
HPO HP:0000418 Narrow nasal ridge "Decreased width of the nasal ridge." [PMID:19152422] This feature may be accompanied by narrow nasal bridge and narrow nasal base, which should be coded separately. HP:0011119
HPO HP:0000494 Downslanted palpebral fissures "The palpebral fissure inclination is more than two standard deviations below the mean." [PMID:19125427] HP:0200006
HPO HP:0007663 Reduced visual acuity HP:0000505
HPO HP:0100775 Dural ectasia "A widening or ballooning of the dural sac surrounding the spinal cord usually at the lumbosacral level." [HPO:sdoelken] Dural ectasia is one of the major manifestations of Marfan syndrome. It may cause low back pain, headaches and neurological signs such as weakness and loss of bowel and bladder function, but in many patients it is asymptomatic. It is also a cause of posterior vertebral scalloping present in radiographs in patients who are diagnosed with Neurofibromatosis. Dural ectasia may also manifest in Ehlers-Danlos Syndrome, cauda equina syndrome and in ankylosing spondylitis. HP:0010303
HPO HP:0000774 Narrow chest "Reduced width of the chest from side to side, associated with a reduced distance from the sternal notch to the tip of the shoulder." [HPO:probinson] HP:0005257
HPO HP:0001187 Hyperextensibility of the finger joints "The ability of the finger joints to move beyond their normal range of motion." [HPO:curators] HP:0006094
HPO HP:0000822 Hypertension "The presence of chronic increased pressure in the systemic arterial system." [HPO:probinson] Hypertension is sustained elevation of resting systolic BP (140 mm Hg or higher), diastolic BP (90 mm Hg or higher), or both. HP:0032263
HPO HP:0001511 Intrauterine growth retardation "An abnormal restriction of fetal growth with fetal weight below the tenth percentile for gestational age." [HPO:probinson] Intrauterine growth restriction is a newer term that is preferred over Intrauterine growth retardation. The causes of IUGR include maternal abnormalities (chronic hypertension, cyanotic heart disease, smoking, drug abuse), placental or umbilical cord abnormalities (including placenta previa and cord anomalies), maternal medicationas, and genetic disorders of the fetus. HP:0001510
HPO HP:0000426 Prominent nasal bridge "Anterior positioning of the nasal root in comparison to the usual positioning for age." [PMID:19152422] A prominent nasal bridge can occur irrespective of the width of the nasal bridge, and the width should be assessed separately. The nasal bridge becomes more prominent with age. Although the nasal root may be anteriorly placed without increasing the space between the eyes, prominence of the nasal bridge may be accompanied by Telecanthus or ocular Hypertelorism. If such findings are present these should be coded separately. Deep-set eyes may lead to the impression of a prominent nasal bridge, but this finding should be coded separately. HP:0000422
HPO HP:0001763 Pes planus "A foot where the longitudinal arch of the foot is in contact with the ground or floor when the individual is standing; or, in a patient lying supine, a foot where the arch is in contact with the surface of a flat board pressed against the sole of the foot by the examiner with a pressure similar to that expected from weight bearing; or, the height of the arch is reduced." [HPO:probinson, PMID:19125433] 'has part' some (flat and ('inheres in' some 'Longitudinal arch of foot (adult human)') and ('has modifier' some abnormal)) HP:0001760
HPO HP:0002808 Kyphosis "Exaggerated anterior convexity of the thoracic vertebral column." [HPO:probinson] HP:0010674
HPO HP:0000256 Macrocephaly "Occipitofrontal (head) circumference greater than 97th centile compared to appropriate, age matched, sex-matched normal standards. Alternatively, a apparently increased size of the cranium." [PMID:19125436] Macrocephaly can be due to hydrocephalus (increased CFSF), megalencephaly (increased brain volume) or thickening of the skull. Head circumference is measured from just above the glabella (the most prominent point on the frontal bone above the root of the nose) to the most posterior prominent point of the occipital bone using a tape measure. Some standard charts are organized by centiles [Hall et al. [2007]], others by standard deviations [Farkas, [1981]]. It is important to add an indication of how far above the normal standard the head circumference is if an accurate assessment of this can be made. Macrocephaly is an absolute term. The term relative macrocephaly can be used when the head size centile exceeds the centile for height, for example, head size at the 75th centile with height at the 5th centile for age and sex. HP:0040194
HPO HP:0000767 Pectus excavatum "A defect of the chest wall characterized by a depression of the sternum, giving the chest (\"pectus\") a caved-in (\"excavatum\") appearance." [HPO:probinson] HP:0000766
HPO HP:0011220 Prominent forehead "Forward prominence of the entire forehead, due to protrusion of the frontal bone." [PMID:19125436] Not to be confused with frontal bossing. HP:0000290
HPO HP:0000325 Triangular face "Facial contour, as viewed from the front, triangular in shape, with breadth at the temples and tapering to a narrow chin." [DDD:jclayton-smith, PMID:19125436] HP:0001999
HPO HP:0001622 Premature birth "The birth of a baby of less than 37 weeks of gestational age." [HPO:probinson] HP:0001197
HPO HP:0100578 Lipoatrophy "Localized loss of fat tissue." [HPO:sdoelken] This may occur as a result of subcutanous injections of insulin in the treatment of diabetes, from the use of human growth hormone or from subcutanous injections of Copaxone used for the treatment of multiple sclerosis. In the latter case, an injection may produce a small dent at the injection site. Lipoatrophy is also an adverse drug reaction that is associated with some antiretroviral drugs. HP:0009125
HPO HP:0000460 Narrow nose "Interalar distance more than 2 SD below the mean for age, or alternatively, an apparently decreased width of the nasal base and alae." [PMID:19152422] Note: a small nose has both decreased height and a decreased width. These should be coded separately. HP:0005105
HPO HP:0001166 Arachnodactyly "Abnormally long and slender fingers (\"spider fingers\")." [HPO:probinson] HP:0001238, HP:0100807
HPO HP:0009064 Generalized lipodystrophy "Generalized degenerative changes of the fat tissue." [HPO:curators] HP:0009125