Phenotypes
Db Link Name Definition Comment Is a
HPO HP:0002616 Aortic root aneurysm "An abnormal localized widening (dilatation) of the aortic root." [] HP:0012727
HPO HP:0002643 Neonatal respiratory distress "Respiratory difficulty as newborn." [HPO:probinson] HP:0002093
HPO HP:0012418 Hypoxemia "An abnormally low level of blood oxygen." [HPO:probinson] Note that hypoxemia is defined as a condition where arterial oxygen tension is below normal (80-100mmHg). Hypoxia is defined as the failure of oxygenation at the tissue level. Hypoxia is not measured directly by a standard laboratory value. HP:0500165
HPO HP:0100578 Lipoatrophy "Localized loss of fat tissue." [HPO:sdoelken] This may occur as a result of subcutanous injections of insulin in the treatment of diabetes, from the use of human growth hormone or from subcutanous injections of Copaxone used for the treatment of multiple sclerosis. In the latter case, an injection may produce a small dent at the injection site. Lipoatrophy is also an adverse drug reaction that is associated with some antiretroviral drugs. HP:0009125
HPO HP:0009901 Crumpled ear "Distortion of the course of the normal folds of the ear and the appearance of supernumerary crura and folds." [PMID:19152421] This is distinct from Stahl ear and Shell ear, with which the term has sometimes been conflated. The appearance often changes markedly after birth. HP:0000377
HPO HP:0010511 Long toe "Toes that appear disproportionately long compared to the foot." [HPO:probinson, PMID:19125433] This finding must be distinguished from digits that are thin but of normal length and that of a short mid and hind foot with normal digit lengths. The affected digits should be specified. If only a subset of the digits of a limb is lengthened, the affected digits should be specified. HP:0001780
HPO HP:0001270 Motor delay "A type of Developmental delay characterized by a delay in acquiring motor skills." [HPO:probinson] HP:0012758
HPO HP:0000973 Cutis laxa "Wrinkled, redundant, inelastic and sagging skin." [HPO:probinson] HP:0008067
HPO HP:0008734 Decreased testicular size "Reduced volume of the testicle (the male gonad)." [HPO:probinson] HP:0000050, HP:0010468
HPO HP:0000494 Downslanted palpebral fissures "The palpebral fissure inclination is more than two standard deviations below the mean." [PMID:19125427] HP:0200006
HPO HP:0003116 Abnormal echocardiogram "An abnormality detectable by sonography of the heart (echocardiography)." [HPO:probinson] Note that while structural heart anomalies can cause abnormal echocardiograpy findings, structural abnormalities are detectable by multiple imaging modalities and should be coded using terms from the hierarchy under 'Abnormality of cardiac morphology' (HP:0001627). HP:0011025, HP:0500015
HPO HP:0005180 Tricuspid regurgitation "Failure of the tricuspid valve to close sufficiently upon contraction of the right ventricle, causing blood to regurgitate (flow backward) into the right atrium." [HPO:probinson] This term should not be applied to Ebstein's anomaly of the tricuspid valve (see HP:0010316). HP:0031651
HPO HP:0001382 Joint hypermobility "The ability of a joint to move beyond its normal range of motion." [HPO:probinson] HP:0011729
HPO HP:0000485 Megalocornea "An enlargement of the cornea with normal clarity and function. Megalocornea is diagnosed with a horizontal corneal diameter of 12 mm or more at birth or 13 mm or more after two years of age." [HPO:curators] HP:0001120
HPO HP:0001252 Hypotonia "Hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle). Even when relaxed, muscles have a continuous and passive partial contraction which provides some resistance to passive stretching. Hypotonia thus manifests as diminished resistance to passive stretching. Hypotonia is not the same as muscle weakness, although the two conditions can co-exist." [HPO:probinson, PMID:21418198] Hypotonia can be caused by abnormalities of the central nervous system, any element of the motor unit (including the lower motoneuron), or both. Hypotonia is not a specific diagnosis, but can be observed in hundreds of genetic and other diseases. The first distinction to make when assessing a child with hypotonia is whether decreased muscle tone is a result of an abnormality of the central nervous system (CNS), peripheral neuromuscular system, or a combined abnormality involving both. Clinical findings suggestive of an abnormality of the CNS may include hyperreflexia, cognitive developmental delay, and seizures. In contrast, physical findings pointing towards a neuromuscular origin may include weakness, lack of antigravity movements, muscle atrophy, fasciculations, and/or diminished reflexes, most often in the context of normal cognitive function. The HPO term does not distinguish between these etiologies. Additional HPO terms should be used as required to describe associated features. HP:0003808
HPO HP:0012771 Increased arm span "Increased length of the arm span (length from one end of an individual's arms measured at the fingertips to the other when raised parallel to the ground at shoulder height at a one-hundred eighty degree angle)." [HPO:probinson] HP:0012769
HPO HP:0001518 Small for gestational age "Smaller than normal size according to sex and gestational age related norms, defined as a weight below the 10th percentile for the gestational age." [DDD:hfirth] HP:0004325
HPO HP:0001181 Adducted thumb "In the resting position, the tip of the thumb is on, or near, the palm, close to the base of the fourth or fifth finger." [PMID:19125433] The thumb is both flexed and adducted. Lesser degrees of adduction than that specified here may warrant the use of this term, for example, when the tip of the thumb lies near the base of F2 or F3. HP:0001172
HPO HP:0001713 Abnormal cardiac ventricle morphology "An abnormality of a cardiac ventricle." [HPO:probinson] HP:0001627
HPO HP:0011003 High myopia "A severe form of myopia with greater than -6.00 diopters." [DDD:ncarter] HP:0000545
HPO HP:0001083 Ectopia lentis "Dislocation or malposition of the crystalline lens of the eye. A partial displacement (or dislocation) of the lens is described as a subluxation of the lens, while a complete displacement is termed luxation of the lens. A complete displacement occurs if the lens is completely outside the patellar fossa of the lens, either in the anterior chamber, in the vitreous, or directly on the retina. If the lens is partially displaced but still contained within the lens space, then it is termed subluxation." [HPO:probinson] HP:0000517
HPO HP:0030961 Microspherophakia "Lens of the eye is smaller than normal and spherically shaped." [] HP:0008063
HPO HP:0000189 Narrow palate "Width of the palate more than 2 SD below the mean (objective) or apparently decreased palatal width (subjective)." [PMID:19125428] Palatal width is measured as the distance between the maxillary first permanent molar on the right and left sides, at the lingual cervical line, using a specific device. Palate width is typically assessed subjectively in routine clinical practice. Narrowing is often associated with a High palate, but this should be assessed and coded separately. Gingival overgrowth can give the impression of a narrow palate but should be distinguished and coded separately. The term gothic palate is used to indicate that the roof of the palate is not round but rather has an inverted V-shape, and therefore, only the upper part of the palate is narrow. HP:0000174
HPO HP:0002938 Lumbar hyperlordosis "An abnormal accentuation of the inward curvature of the spine in the lumbar region." [HPO:probinson] HP:0003307
HPO HP:0001065 Striae distensae "Thinned, erythematous, depressed bands of atrophic skin. Initially, striae appear as flattened and thinned, pinkish linear regions of the skin. Striae tend to enlarge in length and become reddish or purplish. Later, striae tend to appear as white, depressed bands that are parallel to the lines of skin tension. Striae distensae occur most often in areas that have been subject to distension such as the lower back, buttocks, thighs, breast, abdomen, and shoulders." [HPO:probinson] HP:0004334, HP:0100679